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1

Changing epidemiology of methicillin-resistant Staphylococcus aureus in a low endemicity areaânew challenges for MRSA control

Junnila, Jenna, Hirvioja, Tiina, Rintala, Esa, Auranen, Kari, Rantakokko-Jalava, Kaisu, Silvola, Jaakko, Lindholm, Laura, GrÃ¶ndahl-Yli-Hannuksela, Kirsi, Marttila, Harri, Vuopio, Jaana

Journal:

European Journal of Clinical Microbiology & Infectious Diseases

Year:

2020

Language:

english

File:

PDF, 1.03 MB

english, 2020

2

Estimation and interpretation of heterogeneous vaccine efficacy against recurrent infections

Mehtälä, Juha, Dagan, Ron, Auranen, Kari

Journal:

Year:

2016

Language:

english

File:

PDF, 140 KB

english, 2016

3

18F-FDG-PET/CT based total metabolic tumor volume change during neoadjuvant chemotherapy predicts outcome in advanced epithelial ovarian cancer

Vallius, Tuulia, Hynninen, Johanna, Kemppainen, Jukka, Alves, Victor, Auranen, Kari, Matomäki, Jaakko, Oksa, Sinikka, Virtanen, Johanna, Grénman, Seija, Auranen, Annika, Seppänen, Marko

Journal:

European Journal of Nuclear Medicine and Molecular Imaging

Year:

2018

Language:

english

File:

PDF, 977 KB

english, 2018

4

Pneumococcal Transmission and Disease In Silico: A Microsimulation Model of the Indirect Effects of Vaccination

Nurhonen, Markku, Cheng, Allen C., Auranen, Kari, Borrow, Ray

Journal:

Year:

2013

Language:

english

File:

PDF, 1.00 MB

english, 2013

5

Nasopharyngeal colonization: a target for pneumococcal vaccination

Käyhty, Helena, Auranen, Kari, Nohynek, Hanna, Dagan, Ron, Mäkelä, Helena

Journal:

Expert Review of Vaccines

Year:

2006

Language:

english

File:

PDF, 423 KB

english, 2006

6

Modeling transmission of multitype infectious agents: application to carriage of Streptococcus pneumoniae

Panu Erästö, Fabian Hoti, Kari Auranen

Journal:

Statistics in Medicine

Year:

2012

Language:

english

File:

PDF, 325 KB

english, 2012

7

Serotype-Specific Hyporesponsiveness to Pneumococcal Conjugate Vaccine in Infants Carrying Pneumococcus at the Time of Vaccination

Merja Väkeväinen, Anu Soininen, Marilla Lucero, Hanna Nohynek, Kari Auranen, P. Helena Mäkelä, Gail Williams, Helena Käyhty

Journal:

The Journal of Pediatrics

Year:

2010

Language:

english

File:

PDF, 328 KB

english, 2010

8

Evolution of the Capsular Regulatory Genes in Streptococcus pneumoniae

Varvio, Sirkka‐Liisa, Auranen, Kari, Arjas, Elja, Mäkelä, P. Helena

Journal:

The Journal of Infectious Diseases

Year:

2009

Language:

english

File:

PDF, 1.27 MB

english, 2009

9

Social Contacts and Mixing Patterns Relevant to the Spread of Infectious Diseases

Mossong, Joël, Hens, Niel, Jit, Mark, Beutels, Philippe, Auranen, Kari, Mikolajczyk, Rafael, Massari, Marco, Salmaso, Stefania, Tomba, Gianpaolo Scalia, Wallinga, Jacco, Heijne, Janneke, Sadkowska-Tod

Journal:

Year:

2008

Language:

english

File:

PDF, 555 KB

english, 2008

10

Obesity, Underweight, and Smoking Are Associated with Worse Cardiorespiratory Fitness in Finnish Healthy Young Men: A Population-Based Study

Nikolakaros, Georgios, Vahlberg, Tero, Auranen, Kari, Sillanmäki, Lauri, Venetoklis, Takis, Sourander, Andre

Journal:

Frontiers in Public Health

Year:

2017

Language:

english

File:

PDF, 853 KB

english, 2017

11

Divergent coverage, frequency and costs of organised and opportunistic Pap testing in Finland

Salo, Heini, Nieminen, Pekka, Kilpi, Terhi, Auranen, Kari, Leino, Tuija, Vänskä, Simopekka, Tiihonen, Petri, Lehtinen, Matti, Anttila, Ahti

Journal:

International Journal of Cancer

Year:

2014

Language:

english

File:

PDF, 256 KB

english, 2014

12

Optimal observation times for multistate Markov models-applications to pneumococcal colonization studies

Mehtälä, Juha, Auranen, Kari, Kulathinal, Sangita

Journal:

Journal of the Royal Statistical Society: Series C (Applied Statistics)

Year:

2015

Language:

english

File:

PDF, 1.28 MB

english, 2015

13

Estimation of vaccine efficacy against acquisition of pneumococcal carriage

Hanna Rinta-Kokko, Ron Dagan, Noga Givon-Lavi, Kari Auranen

Journal:

Year:

2009

Language:

english

File:

PDF, 222 KB

english, 2009

14

The fundamental link between pneumococcal carriage and disease

Simell, Birgit, Auranen, Kari, Käyhty, Helena, Goldblatt, David, Dagan, Ron, O’Brien, Katherine L

Journal:

Expert Review of Vaccines

Year:

2012

Language:

english

File:

PDF, 1.19 MB

english, 2012

15

Impact of Vaccination on 14 High-Risk HPV Type Infections: A Mathematical Modelling Approach

Vänskä, Simopekka, Auranen, Kari, Leino, Tuija, Salo, Heini, Nieminen, Pekka, Kilpi, Terhi, Tiihonen, Petri, Apter, Dan, Lehtinen, Matti, Wu, Joseph T.

Journal:

Year:

2013

Language:

english

File:

PDF, 327 KB

english, 2013

16

Capturing multiple-type interactions into practical predictors of type replacement following human papillomavirus vaccination

Man, Irene, Auranen, Kari, Wallinga, Jacco, Bogaards, Johannes A.

Journal:

Philosophical Transactions Biological Sciences

Year:

2019

Language:

english

File:

PDF, 602 KB

english, 2019

17

Response and persistence of antibodies to PRP-T and DTwP vaccines with concomitant administration of conjugate vaccines

Arnaldo F. Ocampo, Christel Biltoft, Marilla Lucero, Rose-Marie Ölander, Juanita Ugpo, Kari Auranen, Anu Soininen, Hanna Nohynek, Helena Käyhty

Journal:

Year:

2007

Language:

english

File:

PDF, 196 KB

english, 2007

18

A Hierarchical Bayesian Model to Predict the Duration of Immunity to Haemophilus influenzae Type b

Kari Auranen, Martin Eichner, Helena Kayhty, Aino K. Takala and Elja Arjas

Journal:

Year:

1999

Language:

english

File:

PDF, 1.61 MB

english, 1999

19

Effectiveness of two influenza vaccines in nationwide cohorts of Finnish two-year-old children in the seasons 2015/16-2017/18

Baum, Ulrike, Kulathinal, Sangita, Auranen, Kari, Nohynek, Hanna

Journal:

Clinical Infectious Diseases

Year:

2020

Language:

english

File:

PDF, 634 KB

english, 2020

20

Fast approximate computation of cervical cancer screening outcomes by a deterministic multiple-type HPV progression model

Vänskä, Simopekka, Bogaards, Johannes A., Auranen, Kari, Lehtinen, Matti, Berkhof, Johannes

Journal:

Mathematical Biosciences

Year:

2019

Language:

english

File:

PDF, 1.35 MB

english, 2019

21

Transmission of Pneumococcal Carriage in Families: A Latent Markov Process Model for Binary Longitudinal Data

Kari Auranen, Elja Arjas, Tuija Leino and Aino K. Takala

Journal:

Journal of the American Statistical Association

Year:

2000

Language:

english

File:

PDF, 1.59 MB

english, 2000

22

Antibody response to an eleven valent diphtheria- and tetanus-conjugated pneumococcal conjugate vaccine in Filipino infants

PUUMALAINEN, TANELI, ZETA-CAPEDING, M. ROSE, KÄYHTY, HELENA, LUCERO, MARILLA G., AURANEN, KARI, LEROY, ODILE, NOHYNEK, HANNA

Journal:

Pediatric Infectious Disease Journal

Year:

2002

Language:

english

File:

PDF, 313 KB

english, 2002

23

Long-term impact of 10-valent pneumococcal conjugate vaccination on invasive pneumococcal disease among children in Finland

Rinta-Kokko, Hanna, Palmu, Arto A., Auranen, Kari, Nuorti, J. Pekka, Toropainen, Maija, Siira, Lotta, Virtanen, Mikko J., Nohynek, Hanna, Jokinen, Jukka

Journal:

Year:

2018

Language:

english

File:

PDF, 559 KB

english, 2018

24

A STATISTICAL MODEL OF TRANSMISSION OF Hib BACTERIA IN A FAMILY

KARI AURANEN, JUKKA RANTA, AINO K. TAKALA, ELJA ARJAS

Journal:

Statistics in Medicine

Year:

1996

Language:

english

File:

PDF, 1.10 MB

english, 1996

25

Longitudinal Study on Pneumococcal Carriage During the First Year of Life in Bangladesh

Granat, Simo M., Mia, Zakaria, Ollgren, Jukka, Herva, Elja, Das, Milan, Piirainen, Liisa, Auranen, Kari, M??kel??, P Helena

Journal:

Pediatric Infectious Disease Journal

Year:

2007

Language:

english

File:

PDF, 458 KB

english, 2007

26

Design questions for Streptococcus pneumoniae vaccine trials with a colonisation endpoint

Auranen, Kari, Rinta-Kokko, Hanna, Goldblatt, David, Nohynek, Hanna, O’Brien, Katherine L., Satzke, Catherine, Simell, Birgit, Tanskanen, Antti, Käyhty, Helena

Journal:

Year:

2013

Language:

english

File:

PDF, 708 KB

english, 2013

27

Haploinsufficiency of the NF1 gene is associated with protection against diabetes

KallionpÃ¤Ã¤, Roope A, Peltonen, Sirkku, LeppÃ¤virta, Jussi, PÃ¶yhÃ¶nen, Minna, Auranen, Kari, JÃ¤rvelÃ¤inen, Hannu, Peltonen, Juha

Journal:

Journal of Medical Genetics

Year:

2020

File:

PDF, 292 KB

2020

28

Transmission of Pneumococcal Carriage in Families: A Latent Markov Process Model for Binary Longitudinal Data

Auranen, Kari, Arjas, Elja, Leino, Tuija, Takala, Aino K.

Journal:

Journal of the American Statistical Association

Year:

2000

Language:

english

File:

PDF, 1.32 MB

english, 2000

29

Revealing the True Incidence of Pandemic A(H1N1)pdm09 Influenza in Finland during the First Two Seasons — An Analysis Based on a Dynamic Transmission Model

Shubin, Mikhail, Lebedev, Artem, Lyytikäinen, Outi, Auranen, Kari, Ferrari, Matthew (Matt)

Journal:

PLoS Computational Biology

Year:

2016

Language:

english

File:

PDF, 3.97 MB

english, 2016

30

Pneumococcal Acute Otitis Media in Relation to Pneumococcal Nasopharyngeal Carriage

Syrj??nen, Ritva K., Auranen, Kari J., Leino, Tuija M., Kilpi, Terhi M., M??kel??, P Helena

Journal:

Pediatric Infectious Disease Journal

Year:

2005

Language:

english

File:

PDF, 516 KB

english, 2005

31

Outbreaks ofStreptococcus pneumoniaecarriage in day care cohorts in Finland – implications for elimination of transmission

Fabian Hoti, Panu Erästö, Tuija Leino, Kari Auranen

Journal:

BMC Infectious Diseases

Year:

2009

Language:

english

File:

PDF, 1.21 MB

english, 2009

32

Design and Analysis of Vaccine Studies by M. Elisabeth Halloran, Ira M. Longini, Jr., Claudio J. Struchiner

Journal:

International Statistical Review

Year:

2010

Language:

english

File:

PDF, 238 KB

english, 2010

33

Colonisation endpoints in Streptococcus pneumoniae vaccine trials

Auranen, Kari, Rinta-Kokko, Hanna, Goldblatt, David, Nohynek, Hanna, O’Brien, Katherine L., Satzke, Catherine, Simell, Birgit, Tanskanen, Antti, Käyhty, Helena

Journal:

Year:

2013

Language:

english

File:

PDF, 327 KB

english, 2013

34

Back-calculating the age-specific incidence of recurrent subclinical Haemophilus influenzae type b infection

Journal:

Statistics in Medicine

Year:

2000

Language:

english

File:

PDF, 207 KB

english, 2000

35

Cohort study design for estimating the effectiveness of seasonal influenza vaccines in real time based on register data: The Finnish example

Baum, Ulrike, Auranen, Kari, Kulathinal, Sangita, Syrjänen, Ritva, Nohynek, Hanna, Jokinen, Jukka

Journal:

Scandinavian Journal of Public Health

Year:

2018

Language:

english

File:

PDF, 187 KB

english, 2018

36

Estimating Strain-Specific and Overall Efficacy of Polyvalent Vaccines Against Recurrent Pathogens From a Cross-Sectional Study

Auranen, Kari, Rinta-Kokko, Hanna, Halloran, M. Elizabeth

Journal:

Year:

2013

Language:

english

File:

PDF, 247 KB

english, 2013

37

Effectiveness of 10-valent pneumococcal conjugate vaccine estimated with three parallel study designs among vaccine-eligible children in Finland

Rinta-Kokko, Hanna, Auranen, Kari, Toropainen, Maija, Nuorti, J. Pekka, Nohynek, Hanna, Siira, Lotta, Palmu, Arto A.

Journal:

Year:

2019

Language:

english

File:

PDF, 647 KB

english, 2019

38

Long-term persistence of immunity after immunisation with Haemophilus influenzae type b conjugate vaccine

P.Helena Mäkelä, Helena Käyhty, Tuija Leino, Kari Auranen, Heikki Peltola, Nina Ekström, Juhani Eskola

Journal:

Year:

2003

Language:

english

File:

PDF, 122 KB

english, 2003

39

Clustering of serotypes in a longitudinal study ofStreptococcus pneumoniaecarriage in three day care centres

Tuija Leino, Fabian Hoti, Ritva Syrjänen, Antti Tanskanen, Kari Auranen

Journal:

BMC Infectious Diseases

Year:

2008

Language:

english

File:

PDF, 1010 KB

english, 2008

40

Epidemiology of hepatitis B infection in Finland: Implications for immunisation policy

Karvonen, Tanja, Auranen, Kari, Kuusi, Markku, Leino, Tuija

Journal:

Year:

2017

Language:

english

File:

PDF, 824 KB

english, 2017

41

Simulations for designing and interpreting intervention trials in infectious diseases

Halloran, M. Elizabeth, Auranen, Kari, Baird, Sarah, Basta, Nicole E., Bellan, Steven E., Brookmeyer, Ron, Cooper, Ben S., DeGruttola, Victor, Hughes, James P., Lessler, Justin, Lofgren, Eric T., Long

Journal:

Year:

2017

Language:

english

File:

PDF, 581 KB

english, 2017

42

Replication in genetic studies of complex traits

Mikko J. Sillanpää, Kari Auranen

Journal:

Annals of Human Genetics

Year:

2004

Language:

english

File:

PDF, 126 KB

english, 2004

43

Competition Between Streptococcus Pneumoniae Strains

Mehtälä, Juha, Antonio, Martin, Kaltoft, Margit S., O’Brien, Katherine L., Auranen, Kari

Journal:

Year:

2013

Language:

english

File:

PDF, 426 KB

english, 2013

44

Sustained reduction in vaccine-type invasive pneumococcal disease despite waning effects of a catch-up campaign in Kilifi, Kenya: A mathematical model based on pre-vaccination data

Ojal, John, Flasche, Stefan, Hammitt, Laura L., Akech, Donald, Kiti, Moses C., Kamau, Tatu, Adetifa, Ifedayo, Nurhonen, Markku, Scott, J. Anthony G., Auranen, Kari

Journal:

Year:

2017

Language:

english

File:

PDF, 1.32 MB

english, 2017

45

Effectiveness of 10-valent pneumococcal conjugate vaccine estimated with three parallel study designs among vaccine-eligible children in Finland

Rinta-Kokko, Hanna, Auranen, Kari, Toropainen, Maija, Nuorti, J. Pekka, Nohynek, Hanna, Siira, Lotta, Palmu, Arto A.

Journal:

Year:

2019

File:

PDF, 647 KB

2019

46

Timing of bacterial carriage sampling in vaccine trials: A modelling study

Scott, Pippa, Herzog, Sereina A., Auranen, Kari, Dagan, Ron, Low, Nicola, Egger, Matthias, Heijne, Janneke C.M.

Journal:

Year:

2014

Language:

english

File:

PDF, 813 KB

english, 2014

47

Optimal Serotype Compositions for Pneumococcal Conjugate Vaccination under Serotype Replacement

Nurhonen, Markku, Auranen, Kari, Cohen, Ted

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 2.12 MB

english, 2014

48

A Hierarchical Bayesian Model to Predict the Duration of Immunity to Haemophilus Influenzas Type B

Kari Auranen, Martin Eichner, Helena Käyhty, Aino K. Takala, Elja Arjas

Journal:

Year:

1999

Language:

english

File:

PDF, 856 KB

english, 1999

49

The Value of Nasopharyngeal Culture in Predicting the Etiology of Acute Otitis Media in Children Less Than Two Years of Age

Syrj??nen, Ritva K., Herva, Elja E., M??kel??, P Helena, Puhakka, Heikki J., Auranen, Kari J., Takala, Aino K., Kilpi, Terhi M.

Journal:

Pediatric Infectious Disease Journal

Year:

2006

Language:

english

File:

PDF, 256 KB

english, 2006

50

Acquisition and Transmission of Streptococcus pneumoniae is Facilitated During Rhinovirus Infection in Families with Children

Karppinen, Sinikka, Teräsjärvi, Johanna, Auranen, Kari, Schuez-Havupalo, Linnea, Siira, Lotta, He, Qiushui, Waris, Matti, Peltola, Ville

Journal:

American Journal of Respiratory and Critical Care Medicine

Year:

2017

Language:

english

File:

PDF, 509 KB

english, 2017

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